PLX222125

GSE116086: HDAC inactivation by EP300 disrupts the MiCEE complex in Idiopathic Pulmonary Fibrosis

  • Organsim human
  • Type RNASEQ
  • Target gene
  • Project ARCHS4

Idiopathic pulmonary fibrosis (IPF) is a chronic, progressive and highly lethal lung disease with unknown etiology and poor prognosis. IPF is the most common interstitial pulmonary disease showing a prevalence of 20 new cases per 100,000 persons per year. Unfortunately, these numbers are rising due to increased lung injuries after exposure to air pollution, a consequence of industrialization [21525528; 15653995]. A central event in IPF is the abnormal proliferation and migration of fibroblasts into the lung after lung injury. While fibroblasts under normal circumstances are important for wound healing and connective tissue production, their function in the fibrotic lung is out of control resulting in disproportionate levels of scar tissue, alterations of the alveolar framework, stiffening of the functional lung tissue, loss of the gas exchange function of the lung and dramatically decreased oxygen saturation of the blood [16928146; 20952439]. IPF patients die within 2 to 5 years after diagnosis mostly due to respiratory failure [22850886; 26338155]. Current treatments against IPF aim to ameliorate patient symptoms. However, therapies targeting the causes of IPF have not yet been developed [21169469]. Here we show that reduced MIRLET7D levels in IPF compromises epigenetic silencing mediated by the ribonucleoprotein complex MiCEE. In addition, we found that hyper active EP300 reduces nuclear HDAC activity and interferes with MiCEE function in IPF. Accordingly, EP300 inhibition reduced fibrotic hallmarks of in vitro (patient-derived primary fibroblast), in vivo (bleomycin mouse model) and ex vivo (precision-cut lung slices) IPF models. Our work provides the molecular basis for therapies against IPF using EP300 inhibition. Our study will be the starting point of curative therapeutic approaches targeting the causes of this lethal disease. SOURCE: Karla Rubio (karla.rubio@mpi-bn.mpg.de) - Max Planck Institute for Heart and Lung Research

View on GEOView in Pluto

Key Features

Enhance your research with our curated data sets and powerful platform features. Pluto Bio makes it simple to find and use the data you need.

Learn More

14K+ Published Experiments

Access an extensive range of curated bioinformatics data sets, including genomic, transcriptomic, and proteomic data.

Easy Data Import

Request imports from GEO or TCGA directly within Pluto Bio. Seamlessly integrate external data sets into your workflow.

Advanced Search Capabilities

Utilize powerful search tools to quickly find the data sets relevant to your research. Filter by type, disease, gene, and more.

Analyze and visualize data for this experiment

Use Pluto's intuitive interface to analyze and visualize data for this experiment. Pluto's platform is equipped with an API & SDKs, making it easy to integrate into your internal bioinformatics processes.

Read about post-pipeline analysis

View QC data and experiment metadata

View quality control data and experiment metadata for this experiment.

Request import of other GEO data

Request imports from GEO or TCGA directly within Pluto Bio.

Chat with our Scientific Insights team