PLX219973

GSE93097: Loss of a CDR1as, a conserved mammalian circRNA, causes miRNA de-regulation and a psychiatric phenotype [RNA-seq]

  • Organsim mouse
  • Type RNASEQ
  • Target gene
  • Project ARCHS4

Circular RNAs (circRNAs) are highly expressed in mammalian brains, with oftentimes conserved expression patterns. However, so far no circRNAs loss-of-function has been reported. The circRNA CDR1as has been proposed to function as a sponge for microRNA miR-7. We removed the CDR1as locus from the mouse genome, and performed a series of high-throughput experiments to characterize the gene expression in wild type and knockout mice. Our data reveal the first in vivo loss-of-function phenotype for a circRNA and show that interactions between circRNAs and miRNAs are important for healthy brain function. SOURCE: Nikolaus Rajewsky (nikolaus.rajewsky@mdc-berlin.de) - Rajewsky lab Max Delbrück Center for Molecular Medicine

View on GEOView in Pluto

Key Features

Enhance your research with our curated data sets and powerful platform features. Pluto Bio makes it simple to find and use the data you need.

Learn More

14K+ Published Experiments

Access an extensive range of curated bioinformatics data sets, including genomic, transcriptomic, and proteomic data.

Easy Data Import

Request imports from GEO or TCGA directly within Pluto Bio. Seamlessly integrate external data sets into your workflow.

Advanced Search Capabilities

Utilize powerful search tools to quickly find the data sets relevant to your research. Filter by type, disease, gene, and more.

Analyze and visualize data for this experiment

Use Pluto's intuitive interface to analyze and visualize data for this experiment. Pluto's platform is equipped with an API & SDKs, making it easy to integrate into your internal bioinformatics processes.

Read about post-pipeline analysis

View QC data and experiment metadata

View quality control data and experiment metadata for this experiment.

Request import of other GEO data

Request imports from GEO or TCGA directly within Pluto Bio.

Chat with our Scientific Insights team