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Talk to our team for accessStore large, raw sequencing data files and transform them into biologically-meaningful results in your browser. Gain critical QC information, quantify targets within and across data sets, and run best-in-class computational biology analyses specific to each assay type.
Pathological aggregation of RNA binding proteins (RBPs) has emerged as an important driver of multip...
The spinal cord contains neural networks that enable regionally-distinct motor outputs along the bod...
Identification of antibodies with reprogramming activity from combinatorial libraries SOURCE: Kristi...
Liver zonation characterizes the separation of metabolic pathways along the lobules and is required ...
Analysis of global gene expression changes in mutant KRAS lung adenocarcinoma cells upon Id1 inhibit...
Co-expression and cross-regulation of the four TCF/LEFs render their redundant and unique functions ...
Skeletal muscle stem cells, called satellite cells, are responsible for postnatal muscle growth, hom...
Reads were aligned to the mm10 genome with annotations provided by Ensembl. Transcripts were filter...
Chronic psychosocial stress is a risk factor for psychiatric disorders, and genetic factors interact...
Plasmacytoid dendritic cells (pDCs) are an immune subset devoted to the production of high amounts o...
Genes with different sizes have distinct expression patterns and functions. Here we show that the 3'...
The transcriptional programs that establish neuronal identity evolved to produce a rich diversity of...
Id proteins have been shown to promote the differentiation of conventional and T cells, and to supp...
Compared to intensely studied DNA methylation, protein methylation is less studied. PRMT5 is the maj...
Approximately 30% of metastatic breast cancers harbor estrogen receptor (ER/ESR1) mutations that ar...
We profiled the global transcriptomes of 10 featured AATD-patient specific iPSC that underwent direc...
Patients with systemic lupus erythematosus (SLE) display an increased risk of cardiovascular disease...
All-trans retinoic acid (ATRA) alters gene expression in CCE WT embryonic stem cells, but has no eff...
The identification of the potential mechanisms of resistance while tumor cells still respond to ther...
Chromosomes have an intrinsic tendency to segregate into compartments, forming long-distance contact...
To investigate whether cutaneous melanoma originates from a resident adult melanocyte stem cell (MSC...
Purpose: To ensure that ABX464 acted specifically on HIV splicing and did not significantly or globa...
We aimed to elucidate molecular mechanisms of first lineage decision in the mouse pluripotent epibla...
An IRF8-dependent subset of classical dendritic cells (cDCs), termed DC1, effectively cross-primes C...
We investigate the role of resident memory T cells in protective immunity in HIV infection; ; Fundin...
Despite significant advances in the treatment of multiple myeloma (MM), most patients succumb to dis...
Increases in organismal energy expenditure, as during cold exposure or exercise training, can improv...
Statin-induced myopathy is a common side-effect but its mechanisms in human skeletal muscle have nev...
Despite the ubiquitous mechanical cues at both spatial and temporal dimensions, cell identities and ...
Granulocyte-monocyte progenitors (GMPs) and monocyte-dendritic cell progenitors (MDPs) produce monoc...
We sought to examine whether the non-canonical SMC protein Smchd1 plays a role in chromosome conform...
RNA-sequencing analysis from whole heart ribosome depleted RNA from the 2-week old WT and Lmna-/- ...
T cell receptor (TCR) stimulation of nave CD8+ T cells initiates reprogramming of cis-regulatory lan...
The adoptive transfer of chimeric antigen receptor- (CAR) modified T cells is revolutionizing the tr...
The hematopoietic microenviroment plays a pivotal role in erythropoiesis. Here we compare the transc...
Comparing the relative proportions of immune cells in tumor and adjacent normal tissue from NSCLC pa...
Innate lymphoid cells (ILCs) patrol environmental interfaces to defend against infection and protect...
Transcriptome analysis by high throughput sequencing SOURCE: Yusuke Tarumoto (ytarumot@cshl.edu) - ...
We compared differential gene expression between WT and BAF60c KO and between WT and BAF170 KO card...
Increased susceptibility of circadian clock mutant mice to metabolic diseases has led to the underst...
Circadian clocks exist in almost all levels of living organisms and play elementary roles in the per...
Purpose: RNA-sequencing data was used to determine the main molecular pathways invovled in SDC and d...
The hematological malignancies classified as Mixed Lineage leukemias (MLL) harbor fusions of the MLL...
Intrahepatic cholangiocarcioma has two molecular classification of intrahepatic CCA with distinct cl...
Critical role for TRIM28 and HP1b/g in the epigenetic control of T cell metabolic reprogramming and ...
Human Tregs isolated from PBMCs were sorted into 4 different subpopulations based on IFNg and IL-10 ...
Aging of hematopoietic stem cells (HSCs) is associated with the decline of their regenerative capaci...
Recently, several research groups have identified the mesenchymal subtype of serous OvCa on the basi...
We have generated mice that carry Cre-dependent "knock-in" alleles (MGS34F and IES34F) of U2af1(S34F...
Genetic studies have revealed an essential role for cytosine DNA methylation in gene regulation. How...
We profiled RNA expression in human iPSC-derived ventricular and atrial cardiomyocytes SOURCE: Gabri...
Innate antiviral immune responses are driven by virus-induced changes in host gene expression. In t...
Non-coding genetic variation is a major driver of phenotypic diversity and allows investigation of m...
We analysed the transcriptomes of human embryonic stem cells (hESCs) and in vitro derived axial prog...
Primary and secondary hypertension are major risk factors for cardiovascular disease. Elevated secre...
The serrated adenocarcinoma subtype accounts for 15-30% of all colorectal cancers (CRCs) and is aggr...
Immune-Responsive Gene 1 (Irg1) is a mitochondrial enzyme that produces itaconate under inflammatory...
Intracranial B16 melanoma tumors isolated from C57Bl6 mice were analyzed by mRNAseq. Four experiment...
Most people exposed to stress do not develop depression. Animal models have shown that stress resili...
We irradiated PrEPs derived from four patients undergoing radical prostatectomy according to a HFRT ...
We report a comparison of purified mouse NK cells from mice treated in vivo with either IL-2 cytokin...
Screen the differential genes of Wild Type and HRD1-/- liver under fasted and refed condition SOURCE...
Genetic variation modulating risk of sporadic Parkinsons disease (PD) has been primarily explored th...
Hereditary sensory and autonomic neuropathy type I (HSAN-I) is neurological disorder characterized b...
Pluripotent stem cells can be differentiated into three-dimensional (3D) retinal organoids, with maj...
The pathognomonic EWS/ETS fusion transcription factors drive Ewing sarcoma (EWS) by orchestrating an...
Systems biology approaches can help understand pathogenesis of complex human diseases like cancers f...
Previous studies on transcriptional response to aneuploidy have focused on comparing model cell line...
Androgen receptor (AR) is typically overexpressed in castration-resistant prostate cancer (CRPC). CR...
Purpose: We labeled synchronous cohorts of prenatal and postnatal glutamatergic progenitors to study...
Hematopoietic stem cells (HSCs) can self-renew and/or differentiate into various functionally diverg...
Current lack of insight into mechanisms governing breast cancer metastasis has precluded development...
Transcriptional profiling revealed that murine VH11 and non-VH11 CLL differed in the upregulation of...
A long-prevailing model has held that the seed region (nucleotides 2-8) of a microRNA is typically s...
Transcriptional control of any biological process occurs through the action of one to many gene regu...
RNAseq was performed on bone marrow GMP and neutrophil subsets to understand the difference in their...
The roles of RNA-binding proteins as chaperones in the lifecycles of mRNAs are not well understood. ...
To understand how dynamics of enhancer features correlates with gene expression in adult tissue and ...
To determine whether histone deacetylase (HDAC) inhibition has genome-wide effects on gene expressio...
A PTHrP construct expressing full-length secreted PTHrP (-36-139aa) was stably expressed in MCF7 cel...
In this study, we elucidated differential gene expression between transformed and untransformed muri...
Exploration and dissection of potential actions and effects of long noncoding RNA (lncRNA) in animal...
To investigate the mechanisms by which p53 activation triggers developmental defects, we generated a...
Transcriptome analysis of urothelial KRT5-traced and KRT8-traced YFP-sorted cells with and without c...
TGF/BMP family member Bone Morphogenetic Protein 8b (Bmp8b) is upregulated in NASH (Western Diet -WD...
Prostate cancer (PC) is initially dependent on androgen receptor (AR) signaling for survival and gro...
DNA methylation is a dynamic epigenetic modification that plays a key role in various cellular proce...
Analysis of mouse neural progenitors with non targeting or FUBP1 targeting shRNA in proliferation an...
Tissue regeneration relies on resident stem cells (SCs), whose activity and lineage choices are infl...
The cell-type origin has long been suspected to determine molecular features of tumors but has prove...
The human aged hematopoietic system is prone to dysfunction and clonal selection. Aged hematopoietic...
Macrophages derived from the CH3 mice were treated with the increasing concentrations of the IFNgamm...
Purpose:The purpose of this study is to detect genes Ter-119+CD45Lin cells sorted from spleen of tum...
We report that miR-211 loss-of-function in the pigmented melanoma cell line SKMEL-28 slowed growth ...
Using the expression of IL-18 receptor (CD218) as a surface marker, CD69+ kidney-resident CD8 T cell...
The goals of this study are to compare the transcriptomes of control heterozygous and Tuberous scler...
Here we compare gene expression profiles between lungs and spleens following LPS in vivo injection i...
We report ALPPL2 as a prominently specific and functional surface marker for nave pluripotency. By p...
Delamination of neural progenitor cells (NPCs) from the ventricular surface is a crucial prerequisit...
The enzymes of the poly-ADP-ribose polymerase (PARP) super-family control many relevant cellular pro...